PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g696770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 292aa MW: 32143.8 Da PI: 9.6356

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g696770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Pd.00g696770.m01 57 FICEVCNKGFQREQNLQLHRRGH 79 89*******************88 PP
2	zf-C2H2	14.3	0.00012	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ Pd.00g696770.m01 133 WKCEKCSKRYAVQSDWKAHSKTC 155 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MTSTLKQHSS ATPSSNTTAA AAAPPPQKKR RNQPGNPNPD AEVIALSPKT LMATNRFICE 60 VCNKGFQREQ NLQLHRRGHN LPWKLKQKTT KEPRRKVYLC PEPTCVHHDP SRALGDLTGI 120 KKHFSRKHGE KKWKCEKCSK RYAVQSDWKA HSKTCGTREY RCDCGTLFSS FSGDHHSSGA 180 EQQHLRSSQQ VDNENHLQGL MNSLASGGSS VFGGGGVHGQ DHNSFGGFSS GSTGTRVNAM 240 DQQHNNTNYD EAKLHQNLGV SFGGSDKLTL DFLGVGGMGR TEEYLLAVTD WV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	2e-99	C2H2 family protein