PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g699240.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 435aa MW: 46781.8 Da PI: 9.7034

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g699240.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.3e-05	195	217	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg+ F+ ++L++H+ H Pd.00g699240.m01 195 VCSQCGEIFPKMDSLEHHQAIrH 217 8******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MALLTFVPEA KEPKNKKKAP PPSKRRQKQS SSSKKQQNPP SSSSSSWDQI KNLLTCKQIE 60 GSRVHDPSKN HNIVNGGAGA AAAGYSKLGS SCSSICSFRD VVHGNTRVVH RADNSPESSS 120 LGQETGLLGR NHVTRSSTRS SSSRSNATGT GAAYNTTSAS SSSRGMQFRK LSGCYECHMI 180 VDPSRYPIPR SSVCVCSQCG EIFPKMDSLE HHQAIRHAVS ELGVEDSGRN IVEIIFKSSW 240 QKKDIPICKI ERILKVHNTQ RTIQRFEDCR DAVKNRALST TRKNPRCAAD GNELLRFHCA 300 SISCTLGARG SSSLCGSVPG CGVCTIIRHG FQGKTGGEGG KGVRTTASSG RAHDSLSCTD 360 GRRAMLVCRV IAGRVRRIAD DAPTEEDALS SLSAPGSYDS VAGFAGIYSN LEELVVYNPR 420 AILPCFVVVY KALES

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MALLTFVPEA KEPKNKKKAP PPSKRRQKQS SSSKKQQNPP SSSSSSWDQI KNLLTCKQIE  60
GSRVHDPSKN HNIVNGGAGA AAAGYSKLGS SCSSICSFRD VVHGNTRVVH RADNSPESSS  120
LGQETGLLGR NHVTRSSTRS SSSRSNATGT GAAYNTTSAS SSSRGMQFRK LSGCYECHMI  180
VDPSRYPIPR SSVCVCSQCG EIFPKMDSLE HHQAIRHAVS ELGVEDSGRN IVEIIFKSSW  240
QKKDIPICKI ERILKVHNTQ RTIQRFEDCR DAVKNRALST TRKNPRCAAD GNELLRFHCA  300
SISCTLGARG SSSLCGSVPG CGVCTIIRHG FQGKTGGEGG KGVRTTASSG RAHDSLSCTD  360
GRRAMLVCRV IAGRVRRIAD DAPTEEDALS SLSAPGSYDS VAGFAGIYSN LEELVVYNPR  420
AILPCFVVVY KALES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-163	C2H2 family protein