PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g705310.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 516aa MW: 59433.5 Da PI: 8.3605

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g705310.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.1	5.2e-17	42	124	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ +s+ks+r+g+i++r + C + ++ +++ +r C+a++ +++ek g w+v+k+ ++HnH+l+ Pd.00g705310.m02 42 FYDDYASRVGFLTRVLSSRKSERDGSIISRGLGCRGVSDNGRKVM------QKECGQREFCTAMVLLRQEKPGSWVVKKFLKDHNHPLV 124 9*******************************87766666554......488999****************************96 PP
2	FAR1	80.3	3.4e-25	344	434	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+ Y++++GF++r++++++s +++ i+ r+fvCskeg+r+e+ +++r +r+ tr gC+a+l+++ ++ gkw+++ +++eHnHel+p Pd.00g705310.m02 344 LYEMYGRHMGFTIRNNRTRRSLKDNAIIGREFVCSKEGFRAEKYAM-SQNRVlpSRPATRKGCNAMLRITAKDGGKWVIYGFVKEHNHELNP 434 7******************9****************9887.33333459********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR 60 KSERDGSIIS RGLGCRGVSD NGRKVMQKEC GQREFCTAMV LLRQEKPGSW VVKKFLKDHN 120 HPLVVQSQKS RRTLDEKDKK IQELTAQLRV KKRLSAAYRE QLLAFMKDVE DHNNHLSIKV 180 QSVFDNLKVL EAKAVEEDRK VPLIAKPPLL VSSPKSQTVE PKRTLKSFWV FNFYYLPAIK 240 FNIMGTVRQI PDSLCDGLQK VLVLPNHKLR LMMASTSGQG FSPERNYRCW LDETFSSHET 300 ADDELSYTPD VDNNLIETSS QDFSLSLEPV IGMEFESAED ARDLYEMYGR HMGFTIRNNR 360 TRRSLKDNAI IGREFVCSKE GFRAEKYAMS QNRVLPSRPA TRKGCNAMLR ITAKDGGKWV 420 IYGFVKEHNH ELNPNKIPPR RSHRIAFCED EKDLKIRELS TELHREKKKS AAYQEKLQIV 480 LKYIEEHTQR LSLKVELATN NMRELESEEQ DSSYSD

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR  60
KSERDGSIIS RGLGCRGVSD NGRKVMQKEC GQREFCTAMV LLRQEKPGSW VVKKFLKDHN  120
HPLVVQSQKS RRTLDEKDKK IQELTAQLRV KKRLSAAYRE QLLAFMKDVE DHNNHLSIKV  180
QSVFDNLKVL EAKAVEEDRK VPLIAKPPLL VSSPKSQTVE PKRTLKSFWV FNFYYLPAIK  240
FNIMGTVRQI PDSLCDGLQK VLVLPNHKLR LMMASTSGQG FSPERNYRCW LDETFSSHET  300
ADDELSYTPD VDNNLIETSS QDFSLSLEPV IGMEFESAED ARDLYEMYGR HMGFTIRNNR  360
TRRSLKDNAI IGREFVCSKE GFRAEKYAMS QNRVLPSRPA TRKGCNAMLR ITAKDGGKWV  420
IYGFVKEHNH ELNPNKIPPR RSHRIAFCED EKDLKIRELS TELHREKKKS AAYQEKLQIV  480
LKYIEEHTQR LSLKVELATN NMRELESEEQ DSSYSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	3e-57	FAR1 family protein