PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g705320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 250aa    MW: 29084.9 Da    PI: 8.4682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g705320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.12.2e-2685173290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r++ra+tr gCka+++vk +k++kw++tk+ ++HnH+l+
  Pd.00g705320.m01  85 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSSKWVITKFIKDHNHPLV 173
                       9**************************************99999998****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MHDNTFAIKD KTKHSHFEAF TSQRNFHSRP ENEDLLSLLE SMDSDEGARA VESSSSQALV  60
LYEADSILEP YEGMEFESED AAKIFYDEYA RRVGFVMRVM SCRRSERDGR ILARRLGCNK  120
EGHCVSIRGK FGPVRKPRAS TREGCKAMIH VKYDKSSKWV ITKFIKDHNH PLVVSPREAR  180
QTMDEKDKKI QELTAELRNK KRLCTTYQEQ LTAFTKIVEE YSDQLSKKVQ NVVSNLKEFE  240
SIDRELLQHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-111FAR1 family protein