PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g706830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 929aa MW: 102164 Da PI: 5.4001

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g706830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.8	2.5e-29	569	620	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Pd.00g706830.m01 569 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 620 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 929 aa Download sequence
MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA 60 AMDQISASFG VPSCPSVTYA PLDALNFAEQ NGEALPGTEG GETFNVGGSS FSCEDKIVFQ 120 QMDTPQFGVS TAHDANDLAA KLNNGSFQQN NVMDVGKYMI SRPPGLSLNE KMLKALSLFK 180 ESSGGGILAQ LWVPVKYGDH YLLSTSEQPY LLDHILAGYR EVSRTFTFPA EEKQGSILGL 240 PGRVFVSKVP EWTSNVSYYN KAEYLRVDHA VNHQVRGSIA LPVFNFDSEM SCCAVLELVS 300 TKEKPNFDTE MEIVCNALQA VNLRTMVPPR LLPQCLSMNQ RAALTEITDV LRAVCHAHIL 360 PLALTWIPCC YSEGDGDEIS RVRVRGGITN SNEKSILCID ETACYVNDRM MQGFVHACVE 420 HHLEVGEGIA GKALQSNHPF FLHDVKVYDI YEYPLVHHAR KYGLNAAVAI RLRSTYTGTM 480 QKMCKSLRTV SDAELAGVQG SDTGFQKGPI PNSPQQRNSQ TASSDSEFNS IENMPSDVFN 540 RRNAGIEAEN PCEQAPGSRR QMEKKRSTAE KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL 600 KRICRQHGIS RWPSRKINKV NRSLKKIQTV LDSVQGVEGG LKYDPTTGGF VATGSIIQDF 660 DAQKSRLFPE KSLPVQHSEL VTQDPVPVPS VSCNNGESVA IKLEEDGCCI PTSHEEGVKK 720 QNIPLMPQRD SKPIAMEGNK WGHSKNSLKL ENSDCHFVSQ SSSSLAAADD MDTGVDGDDG 780 IVEYNQHTSS SMTDSTNCSG STLRSSSSQS FEEQKQPNMN ASSVENGSKI TVKATYKEDT 840 IRFKFDPSVG CFQLYEEVAK RLKLQNGTFQ LKYLDDEEEW VMLVSDADLR ECLEILDDIG 900 TRSVKFMVRD TPFGVSSSGS SNCFLARGL

Sequence ? help Back to Top

Protein Sequence Length: 929 aa Download sequence

MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA  60
AMDQISASFG VPSCPSVTYA PLDALNFAEQ NGEALPGTEG GETFNVGGSS FSCEDKIVFQ  120
QMDTPQFGVS TAHDANDLAA KLNNGSFQQN NVMDVGKYMI SRPPGLSLNE KMLKALSLFK  180
ESSGGGILAQ LWVPVKYGDH YLLSTSEQPY LLDHILAGYR EVSRTFTFPA EEKQGSILGL  240
PGRVFVSKVP EWTSNVSYYN KAEYLRVDHA VNHQVRGSIA LPVFNFDSEM SCCAVLELVS  300
TKEKPNFDTE MEIVCNALQA VNLRTMVPPR LLPQCLSMNQ RAALTEITDV LRAVCHAHIL  360
PLALTWIPCC YSEGDGDEIS RVRVRGGITN SNEKSILCID ETACYVNDRM MQGFVHACVE  420
HHLEVGEGIA GKALQSNHPF FLHDVKVYDI YEYPLVHHAR KYGLNAAVAI RLRSTYTGTM  480
QKMCKSLRTV SDAELAGVQG SDTGFQKGPI PNSPQQRNSQ TASSDSEFNS IENMPSDVFN  540
RRNAGIEAEN PCEQAPGSRR QMEKKRSTAE KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL  600
KRICRQHGIS RWPSRKINKV NRSLKKIQTV LDSVQGVEGG LKYDPTTGGF VATGSIIQDF  660
DAQKSRLFPE KSLPVQHSEL VTQDPVPVPS VSCNNGESVA IKLEEDGCCI PTSHEEGVKK  720
QNIPLMPQRD SKPIAMEGNK WGHSKNSLKL ENSDCHFVSQ SSSSLAAADD MDTGVDGDDG  780
IVEYNQHTSS SMTDSTNCSG STLRSSSSQS FEEQKQPNMN ASSVENGSKI TVKATYKEDT  840
IRFKFDPSVG CFQLYEEVAK RLKLQNGTFQ LKYLDDEEEW VMLVSDADLR ECLEILDDIG  900
TRSVKFMVRD TPFGVSSSGS SNCFLARGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein