PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g708480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 281aa    MW: 31760.8 Da    PI: 5.9413
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g708480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.82.5e-183784148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd+ l ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
  Pd.00g708480.m01 37 RGPWTVEEDLALMNYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 84
                      89********************************************97 PP
2Myb_DNA-binding50.45e-1690133146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg  T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  Pd.00g708480.m01  90 RGDITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 133
                       67789*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDGVQGGGRG CNNSSSASAT IENEIHKEAE DQMDLRRGPW TVEEDLALMN YIANHGEGRW  60
NSLARCAGLK RTGKSCRLRW LNYLRPDVRR GDITLEEQLL ILELHSRWGN RWSKIAQHLP  120
GRTDNEIKNY WRTRVQKHAK QLKCDVNSKQ FKDTMSHHFG ASSHSHVTPS YTPDNSSTAA  180
SSDSFGAQVS PVSDLTDYYT PTTASTTISV NNNPTPDNYF VQANHQVGSY DQCFNPGLGS  240
EHFQGMEQPD NYQWGVDGGD ISDNFWNVED MWFLQEQLSN I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.12e-79MYB family protein