PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g710550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 502aa MW: 55418.6 Da PI: 6.3262

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g710550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.6	1.8e-14	220	271	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + +r+ ++lg ++ +++Aa+a++ a++k++g Pd.00g710550.m01 220 SIYRGVTRHRWTGRYEAHLWD----NsCRREVYLGGYDKEDKAARAYDLAALKYWG 271 57**************999....4456******99***********98 PP
2	AP2	49.9	7.9e-16	314	365	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Pd.00g710550.m01 314 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 365 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MEMLRSSESE SPFVPYDTSS TASPHYFLDN FYANGWTNPK SQGFFADGED HNNQSKQGHA 60 DSPNLTSFID PQSHHQPIPK LEDFLGDSSS MVRYSDSQTE TQDSSSLTHM YDQSSAYFGD 120 HRQQQDLKAI TGFQAFSTNS GSEVEDSASM ARTTQLAGAE FTGHSIESNG NELGGGFSSC 180 GTNALSLGVT TQSSSQSKAI VPADSDGSKK IADTFGQRTS IYRGVTRHRW TGRYEAHLWD 240 NSCRREVYLG GYDKEDKAAR AYDLAALKYW GPTATTNFPV STYSKELEDM KHVTKQEFIA 300 SLRRKSSGFS RGASIYRGVT RHHQQGRWQA RIGRVAGNKD LYLGTFATEE EAAEAYDIAA 360 IKFRGINAVT NFEMNRYDVE AIGKSSLPVG GAAKRLKLSL EAEEQKPSVN HDQQRPQCSS 420 GSNNINFTSM QPAVQSIPCG IPYDAAAATA YYHHNLFQQF QPNYYGACDS SGLTPSIASA 480 TQMSMMPQQP AEFYIWPHHQ SN

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MEMLRSSESE SPFVPYDTSS TASPHYFLDN FYANGWTNPK SQGFFADGED HNNQSKQGHA  60
DSPNLTSFID PQSHHQPIPK LEDFLGDSSS MVRYSDSQTE TQDSSSLTHM YDQSSAYFGD  120
HRQQQDLKAI TGFQAFSTNS GSEVEDSASM ARTTQLAGAE FTGHSIESNG NELGGGFSSC  180
GTNALSLGVT TQSSSQSKAI VPADSDGSKK IADTFGQRTS IYRGVTRHRW TGRYEAHLWD  240
NSCRREVYLG GYDKEDKAAR AYDLAALKYW GPTATTNFPV STYSKELEDM KHVTKQEFIA  300
SLRRKSSGFS RGASIYRGVT RHHQQGRWQA RIGRVAGNKD LYLGTFATEE EAAEAYDIAA  360
IKFRGINAVT NFEMNRYDVE AIGKSSLPVG GAAKRLKLSL EAEEQKPSVN HDQQRPQCSS  420
GSNNINFTSM QPAVQSIPCG IPYDAAAATA YYHHNLFQQF QPNYYGACDS SGLTPSIASA  480
TQMSMMPQQP AEFYIWPHHQ SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	1e-174	AP2 family protein