PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g712980.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 246aa    MW: 27642.8 Da    PI: 10.6157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g712980.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.4e-08158198954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Pd.00g712980.m01 158 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 198
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MMTMMMQMQM QKQQSPDHFC DSYHNSSNPT FPEIDFTWGS NSNSNSNITN NIETISSLPI  60
FHNPNAVSSQ HSQPTLINPA LPSSVSFMGN QIQEPLTPRL IKTSPPPTSY EKRNSMAAMR  120
EMIFRIAAMQ PIQIDPESVK PPKRRNVKIS KDPQSVAARH RRERISEKIR ILQRLVPGGT  180
KMDTASMLDE AIHYVKFLKK QVQTLERAGA DRPIGVGFQG AGQLANVNYS ALLRPSHLVG  240
SMQMLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.17e-49bHLH family protein