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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Pd.00g713250.m01 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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| Family | B3 | ||||||||
| Protein Properties | Length: 422aa MW: 47131.3 Da PI: 5.1693 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 62.2 | 8.7e-20 | 64 | 154 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
f+k l++s+v + ++ lp f+++h + +++t+tledesgr+ ++k+i k++ l++GW++F+ +++L egD++vF+l++ ++f +
Pd.00g713250.m01 64 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--K 148
89************************644..678****************666665....9**********************9876666..9 PP
EEEE-S CS
B3 94 vkvfrk 99
v ++r+
Pd.00g713250.m01 149 VYIIRS 154
998886 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 422 aa Download sequence |
MPMKELSNTQ IKNMLGQAGK SPALSNTQYE FPVDGSPSRG QAKSSAVIQA QEVRSKLEPR 60 FPSFVKSLVR SHVASCFWMG LPSLFCKSHL PDKDITMTLE DESGRQCQLK YIAYKTGLSA 120 GWRQFAASHN LIEGDVLVFQ LVEPTKFKVY IIRSNDLTEV DGGLGLLNLD SHTKRKDADK 180 DNAETGTEAC NDATRKRAHS PPSEAQKKKK IGLQPVEQSE DDSDEVDSEV LEESKSPDTA 240 LQFEDIQSFE NFSILLNGLL VDSELPEDVR RKYYKLCCSQ NAFLHENVAE GMNHKLVVGA 300 ISETVNIADA IKTCKLTTTW DDFVSWDKYL KAFELLGMNV GFLRDRLCRL ANLSNDSGAA 360 VEARMYKEAK IERSQAGIGI RNIEVKLEEL RDVCDEFGAA IESLRSKAEI YTLKFHEEVT 420 AP |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 195 | 210 | RKRAHSPPSEAQKKKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G19184.1 | 1e-38 | B3 family protein | ||||




