PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g713940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 208aa    MW: 21486.8 Da    PI: 6.4892
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g713940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof107.37.8e-342877251
            zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPv 51
                      ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++Pv
  Pd.00g713940.m01 28 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPV 77
                      57899********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MPSDSSDQQN NQNRRPAKTQ TPGAPPPEQE HLPCPRCDST NTKFCYYNNY NFSQPRHFCK  60
SCRRYWTHGG TLRDIPVVFM NPGGAAAFGD MKGNVGNGCG GGGGGASFTS LLNTQGPGFL  120
ALGGFGLGLA NGFEEMGFGL GRAVWPFPGV GDGGAGIGGN GGGHGMMNTW QFESGEDGGI  180
ANVGVGSVGG EFCSWPELAI STPGNGLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.12e-36Dof family protein