PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g714000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 206aa    MW: 23200 Da    PI: 6.6685
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g714000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.62.1e-22112203198
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffk+ +++ + ++grlv+pk+f +++ gkk   k ++l+d s r+W vk+i +++s+r  l++GW +Fv++  Lk+gD++vF+l++r+++ ++
  Pd.00g714000.m01 112 FFKAIMHKAYVNNGRLVIPKSFQNSCIGKK---KYVRLQD-SKRRWLVKCISNRNSSR--LSAGWYQFVRDRALKVGDVCVFELIDRNDAVMK 198
                       89*********************9995553...4699999.899******88888877..9**************************9*99** PP

                       EEEE- CS
                B3  94 vkvfr 98 
                       v++fr
  Pd.00g714000.m01 199 VSIFR 203
                       **998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MAVSKNDRSL EEGHDNAIHG TQNVDGQGFG SADGTTTSQA ICAIKNEVID VESDTSMDID  60
EPDTQEDQLN EDSEIALPRE LGSTEHFYSR TQMENPSEAL EAAKKFSSKH PFFKAIMHKA  120
YVNNGRLVIP KSFQNSCIGK KKYVRLQDSK RRWLVKCISN RNSSRLSAGW YQFVRDRALK  180
VGDVCVFELI DRNDAVMKVS IFRCNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-21B3 family protein