PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g716320.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-PHD

Protein Properties

Length: 750aa MW: 84869.6 Da PI: 9.8251

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g716320.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	34.2	4.4e-11	527	570	10	53
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 + +e L ++F +n ps++ +e L+k+lgL+ ++V+ WF+N R+ Pd.00g716320.m01 527 KAVEKLRQVFSENELPSRDVKENLSKELGLDPDKVSKWFKNARY 570 67899*************************************97 PP
2	PHD	40.2	7.9e-14	285	340	1	51
SBTTTSSTCT..TSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgksde..egelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C+ +++ +++++lCd +C+++fH+kCl+++l++e++p+g w+C+ C++k Pd.00g716320.m01 285 FCAKCKLNEAfpDNDIILCDgTCNSAFHQKCLDPPLDTENIPRGdqGWFCKFCECK 340 699999955455******56*****************999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MAIDLNWLMS ALGVGSPIKF TWPLGIWPIT FLQSPAVHRS LFFFSIDTLV SRMRGLGKKS 60 SLKESGKPRY SNSVAKLISS PKFRKGGKVS HVKKIKPRSK TIIASCLSKK RGADSTRKGS 120 RNNDTDKKLM SRKGVHKVHD TNSSKKLSSV KLQDEKFSFK DSDKKGENAD GEVKLRIKRR 180 RKKKLQKDKV ELDETSRLQR RTRYLLIKIK LEQNLIDAYS GEGWKGQSRE KIKPEKELQR 240 AKKQILKCKL GIRDAIHQLY SLSSVGSMAD SVIAADGSVY HEHIFCAKCK LNEAFPDNDI 300 ILCDGTCNSA FHQKCLDPPL DTENIPRGDQ GWFCKFCECK MEILEVVNAH LGTCFSNDCG 360 WQDVFKEEAA FPDGENSLLN PDEEWPSDDS EDDDYNPERN ENSCSFSMGG TEDNASDDEL 420 STDVSVGSDE STDGEVVSGR RQRRRVDYKK LYDEMFGKDG PLHEQISDDE DWGPVKRKRR 480 EKESDAASTL MTLYESERIP DVTPTEVKSK HPPDTQVRRA CFRIPRKAVE KLRQVFSENE 540 LPSRDVKENL SKELGLDPDK VSKWFKNARY LALKTRKEES ATNLHTVTPG ISKESTLENV 600 TEKAADLMAS DSDDFLAETV VHSPRNVKKS FRRKHPKSLS SPLRKNQQKG SSCGSPAKRN 660 KDGMELSDNV SLKKLLKERT KEKKANLIAG GGCRVAELEM ERLCKAKGRL ENMRQKLLKF 720 QNAKAKKSNK SLLHEQSVIY VPIAELKDKV

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MAIDLNWLMS ALGVGSPIKF TWPLGIWPIT FLQSPAVHRS LFFFSIDTLV SRMRGLGKKS  60
SLKESGKPRY SNSVAKLISS PKFRKGGKVS HVKKIKPRSK TIIASCLSKK RGADSTRKGS  120
RNNDTDKKLM SRKGVHKVHD TNSSKKLSSV KLQDEKFSFK DSDKKGENAD GEVKLRIKRR  180
RKKKLQKDKV ELDETSRLQR RTRYLLIKIK LEQNLIDAYS GEGWKGQSRE KIKPEKELQR  240
AKKQILKCKL GIRDAIHQLY SLSSVGSMAD SVIAADGSVY HEHIFCAKCK LNEAFPDNDI  300
ILCDGTCNSA FHQKCLDPPL DTENIPRGDQ GWFCKFCECK MEILEVVNAH LGTCFSNDCG  360
WQDVFKEEAA FPDGENSLLN PDEEWPSDDS EDDDYNPERN ENSCSFSMGG TEDNASDDEL  420
STDVSVGSDE STDGEVVSGR RQRRRVDYKK LYDEMFGKDG PLHEQISDDE DWGPVKRKRR  480
EKESDAASTL MTLYESERIP DVTPTEVKSK HPPDTQVRRA CFRIPRKAVE KLRQVFSENE  540
LPSRDVKENL SKELGLDPDK VSKWFKNARY LALKTRKEES ATNLHTVTPG ISKESTLENV  600
TEKAADLMAS DSDDFLAETV VHSPRNVKKS FRRKHPKSLS SPLRKNQQKG SSCGSPAKRN  660
KDGMELSDNV SLKKLLKERT KEKKANLIAG GGCRVAELEM ERLCKAKGRL ENMRQKLLKF  720
QNAKAKKSNK SLLHEQSVIY VPIAELKDKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	184	KRRRKKK
2	179	185	RRRKKKL
3	180	210	RRKKKLQKDKVELDETSRLQRRTRYLLIKIK
4	180	186	RRRKKKL
5	181	211	RRKKKLQKDKVELDETSRLQRRTRYLLIKIK
6	440	445	RRQRRR
7	477	482	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.2	1e-155	HB-PHD family protein