PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g716900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 115aa    MW: 13079 Da    PI: 6.956
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g716900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.13.8e-14531003785
                       EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                         +d++g +W++++iyr+ ++r++lt+GW+ F ++++L +gD v+F  +
  Pd.00g716900.m01  53 A-KDLHGLEWRFRHIYRGPPRRHLLTTGWSIFISQKNLVSGDAVLFLSK 100
                       3.89******************************************843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MEMPTFDLQP QIFCKVVNVQ LLANKENDEV YTHVTLLPQP ELVGTNLDGK ELAKDLHGLE  60
WRFRHIYRGP PRRHLLTTGW SIFISQKNLV SGDAVLFLSK RNDVLPESFG ASGFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61830.18e-29ARF family protein