PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g718990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 399aa MW: 44722.8 Da PI: 8.1676

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g718990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+++++++G g+W+++++ g+ R++k+c++rw +yl Pd.00g718990.m01 14 KGLWSPEEDDKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45.2	2.2e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ Pd.00g718990.m01 67 RGPFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDDKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVLDQDDKEI SKLSPTYRSN EKASVGSNEL NLAEAVNSKP PAVSENRYPV 180 EVSSSSKVLN NNSNNGSSKN LTAVNPPTQE FFLDRACTTS HEGSTSSCRP YDLVGYFSFH 240 QNQSNYGSDM GLAVNPNTTF SFLNQNPRSS EMLPVDFSSS MTPSLLPTMS SSSSIFTTPP 300 TQPVKSDDAE EIKWSEYLHS PFLMGTTTTA IQNHHQAFQH NNTYTHDQVK PETSQFLSNS 360 SSATTTTSTW HHQNQQAFQA SEMCTKDLQR LAVAFGQTL

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDDKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGPF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPNTHKPLS EVLDQDDKEI SKLSPTYRSN EKASVGSNEL NLAEAVNSKP PAVSENRYPV  180
EVSSSSKVLN NNSNNGSSKN LTAVNPPTQE FFLDRACTTS HEGSTSSCRP YDLVGYFSFH  240
QNQSNYGSDM GLAVNPNTTF SFLNQNPRSS EMLPVDFSSS MTPSLLPTMS SSSSIFTTPP  300
TQPVKSDDAE EIKWSEYLHS PFLMGTTTTA IQNHHQAFQH NNTYTHDQVK PETSQFLSNS  360
SSATTTTSTW HHQNQQAFQA SEMCTKDLQR LAVAFGQTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	2e-89	MYB family protein