PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g720350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 246aa    MW: 28655.4 Da    PI: 6.558
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g720350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.62.1e-2353140290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                        Yn+YA++vGFsvr+ +++++ +++ + +  + Cskeg+r +++ + e ++ ++ etrtgCka+++   ++ d++w+v+ ++ eHnHela
  Pd.00g720350.m01  53 LYNNYATRVGFSVRRGQKRYN-TKKVMRQFSYLCSKEGFRLDSDPS-ELSKVSKLETRTGCKASIRFAFQDeDDTWKVSYFVPEHNHELA 140
                       7****************9998.66779999************9999.99999****************9999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MFDKMMLWPV FIDVESDEEN VREKDPMIVN RVENIDEDLL GRVVSTEEEA YSLYNNYATR  60
VGFSVRRGQK RYNTKKVMRQ FSYLCSKEGF RLDSDPSELS KVSKLETRTG CKASIRFAFQ  120
DEDDTWKVSY FVPEHNHELA KPEERQFLRS NRKVSYSNLG VIKTMVGAGI RTTNTYSYLA  180
EEVGGSQNVG FTKRDCYNVV SKEKMAMIEA GDAQSLMNLF KRKQAEDPMF FYTVQVDQEN  240
RMTKNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-32FAR1 family protein