PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g726970.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 300aa    MW: 33449.1 Da    PI: 4.2847
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g726970.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.26.3e-2391411128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                       +p Gf+FhP+d+el+ +yL +kv g++++ ++v++e+++y   e wd+ +     k  ++ +++yfF+k +  + +g+r  r++ +g Wk   
  Pd.00g726970.m01   9 VPIGFKFHPSDDELLRYYLLNKVCGTPFKYSNVVPEFNLYGRkESWDIWNdfggqK-LEKGEDLYFFTKLKLVTGKGSRVARTIGNGSWKGED 100
                       589***************************9*******9975499***75345422.3356789****************************9 PP

               NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + ++v++   k++  gl + + +   ++++ ++  W+mhey+l
  Pd.00g726970.m01 101 RGTTVCDPakKNTPLGLCRRFRYE--NDKSDQHGCWIMHEYSL 141
                       999999985566669999999997..44445699*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MAPCEYVDVP IGFKFHPSDD ELLRYYLLNK VCGTPFKYSN VVPEFNLYGR KESWDIWNDF  60
GGQKLEKGED LYFFTKLKLV TGKGSRVART IGNGSWKGED RGTTVCDPAK KNTPLGLCRR  120
FRYENDKSDQ HGCWIMHEYS LHRSLVKPHS NSNTCGGDAQ GFNYDLSQFL DDDDVEILMK  180
DLSNLDNIQP LAAQPLGGGS HPYPSIIQEA AVDEDSGNIN SGFGISSEDQ TGGELGTENV  240
QLNVLGFPVH DNEMLDFLNR ASFDDLVDMI QFDDNDDELQ AFAMSQSVMG MESTTTAATC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.19e-17NAC family protein