PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g730180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 235aa    MW: 26737.5 Da    PI: 9.8649
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g730180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-15108150145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       rg+ ++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+
  Pd.00g730180.m01 108 RGNISPEEEDLIIRMHKLLGNK-WSLIAGRLP-GRTDNEIKNFWN 150
                       7899******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEGGLLLDVV VSEGAAILKL LASKDQPLLV FRFAFAFFNN EGAWHRKAPS FIRPIADLMT  60
VRLKPQPNGT APRVKIDSFP WQARQGLNRS GKSCRLRWLN YLRPDVKRGN ISPEEEDLII  120
RMHKLLGNKW SLIAGRLPGR TDNEIKNFWN INLSRRVLEE GRSPNNQRGI KTFNCTKASP  180
MIPSHDDHDH DQMVENAADA TLPGSVRKDH ENSFLRDLDN FINDLLRDSG INGEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.11e-39MYB family protein