PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g730470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 214aa MW: 24315.5 Da PI: 9.5547

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g730470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed+ l+d+++ +G g W+ +a++ g++R++k+c++rw++yl Pd.00g730470.m01 14 RGAWCPKEDKVLADYIRTHGEGKWSHVAKKTGLKRSGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	49.4	1e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+ Pd.00g730470.m01 67 RGNISPEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEIKNFWN 109 7999****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MGRKLSGDKE VVKRGAWCPK EDKVLADYIR THGEGKWSHV AKKTGLKRSG KSCRLRWLNY 60 LRPDVKRGNI SPEEEDLIIR MHKLLGNRWS LIAGRLPGRT DNEIKNFWNI NLSKRVPEAR 120 PHRIKINAKN DGADEGGNCS AKDDQVQVIQ SITLNCTKAA AMIPSHHHLH DGDQRVNIQD 180 QRVVDDISSS SFLRDLDNFI NDVLHESEIN GDQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	2e-57	MYB family protein