PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g730760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 110aa    MW: 12604 Da    PI: 6.0932
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g730760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.4e-084252345
                      -HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwq 45
                      +W++Ia +++ gRt++++k++w+
  Pd.00g730760.m01  4 RWSLIAGRLP-GRTDNEIKNFWN 25
                      4*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MIIRWSLIAG RLPGRTDNEI KNFWNINLSR RVLEEGRSPN NQRGIKTFNC TKASPMIPSH  60
DDHDHDQMVE NAADATLPGS VRKDHENSFL RDLDNFINDL LRDSGINGEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.13e-15MYB family protein