PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g733110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 223aa    MW: 25627.2 Da    PI: 10.4847
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g733110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92.1e-141097198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      ffkvl     + s++l +p +f+ +++g+ +++   +l++ s  +W v++  +k  ++++++kGWk+Fv++++Lk  +f+vF + g+ +f  +v 
  Pd.00g733110.m01 10 FFKVL--VGDF-SNQLQIPPPFLVHFNGNVPQQ--SRLRT-SAGTWAVNV--QKVNDKFFFQKGWKKFVHDHDLKLCEFLVFGYAGNLGF--YVD 94
                      56666..3444.456*******98885554453..56666.7789*****..999999**************************998888..787 PP

                      EE- CS
                B3 96 vfr 98
                      ++ 
  Pd.00g733110.m01 95 IYG 97
                      765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVMARRKPSF FKVLVGDFSN QLQIPPPFLV HFNGNVPQQS RLRTSAGTWA VNVQKVNDKF  60
FFQKGWKKFV HDHDLKLCEF LVFGYAGNLG FYVDIYGRDG CKKKFVTAIR ERGRRPHEEG  120
HGNVIHRRSP RHHGKQNLPS IDPIKYEATD TESETSMHPL ATSTGKTIPL QRNNSFNSEK  180
PFFKIAIQNS YIRRGYMDTS HRAASYRYSS GFGWENLACQ VGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-16B3 family protein