PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g733110.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 288aa    MW: 33097 Da    PI: 10.3373
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g733110.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.5e-141097198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      ffkvl     + s++l +p +f+ +++g+ +++   +l++ s  +W v++  +k  ++++++kGWk+Fv++++Lk  +f+vF + g+ +f  +v 
  Pd.00g733110.m02 10 FFKVL--VGDF-SNQLQIPPPFLVHFNGNVPQQ--SRLRT-SAGTWAVNV--QKVNDKFFFQKGWKKFVHDHDLKLCEFLVFGYAGNLGF--YVD 94
                      56666..3444.456*******98885554453..56666.7789*****..999999**************************998888..777 PP

                      EE- CS
                B3 96 vfr 98
                      ++ 
  Pd.00g733110.m02 95 IYG 97
                      765 PP
2B362.19.4e-20182264187
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       ffk+ +++++ ++g ++lp++f+++h   +e++ t+tl+ ++g++W vkl +++ +g+  l+ G   F+++n+L++gD++vF l+++
  Pd.00g733110.m02 182 FFKIAIQNSYIRRGYMYLPRNFVRTHL--TEQQATVTLRVSDGKTWPVKLAFEGERGK--LGCGFMTFCRDNKLEVGDMCVFVLINK 264
                       99************************5..346779***************99888888..**********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVMARRKPSF FKVLVGDFSN QLQIPPPFLV HFNGNVPQQS RLRTSAGTWA VNVQKVNDKF  60
FFQKGWKKFV HDHDLKLCEF LVFGYAGNLG FYVDIYGRDG CKKKFVTAIR ERGRRPHEEG  120
HGNVIHRRSP RHHGKQNLPS IDPIKYEATD TESETSMHPL ATSTGKTIPL QRNNSFNSEK  180
PFFKIAIQNS YIRRGYMYLP RNFVRTHLTE QQATVTLRVS DGKTWPVKLA FEGERGKLGC  240
GFMTFCRDNK LEVGDMCVFV LINKIEFLFE AVFYRKTEAS SCTSSPGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18090.11e-19B3 family protein