PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g733230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 253aa    MW: 28571.1 Da    PI: 6.4215
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g733230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.95.6e-1113753599
                      EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99
                      ++ le ++g +W vkl  r + g+++l+kGW eF+k   Lk g  + F++ g+ s f  +v++f +
  Pd.00g733230.m01 13 KIFLEVPDGAVWPVKL-TRPCNGEIWLQKGWPEFAKFYSLKHGCLLFFRYGGEhSHF--RVRIFMR 75
                      68999***********.5888888**************************9976777..9998865 PP
2B345.51.4e-141602481398
                       TT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..EEEEE- CS
                B3  13 sgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelvvkvfr 98 
                       ++ + ++ +fa++h    g+  +  ++tl+   + rsW vk+ y++++++ +   GW  Fvk+n+L+egD  vF+l+++  ++  + v++fr
  Pd.00g733230.m01 160 NASIPISVPFANKHicaRGV-SS--DVTLQIsNDERSWAVKCMYNGRPRTRFHNFGWGAFVKDNHLEEGDAGVFELINKgpDKIAFEVSIFR 248
                       566779999*****997555.34..4555542688***************999**********************99542455555666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MLVMEYGDLM ADKIFLEVPD GAVWPVKLTR PCNGEIWLQK GWPEFAKFYS LKHGCLLFFR  60
YGGEHSHFRV RIFMRNTLEM KYVSSSTDDE ADGNSNPSSE TEGQGNKHDR GKRTHGADHG  120
GKSTASEAPL RTFAKTQLED LAYSKALSFK SNNPFFCDEN ASIPISVPFA NKHICARGVS  180
SDVTLQISND ERSWAVKCMY NGRPRTRFHN FGWGAFVKDN HLEEGDAGVF ELINKGPDKI  240
AFEVSIFRVE DEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-19B3 family protein