PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g733950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 407aa MW: 45333.2 Da PI: 4.9929

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g733950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.9	6.8e-17	54	130	15	99
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l lp f+++h + +++t+tledesgr+ ++k+i k++ l++GW++F+ +++L egD++vF+l++ ++f +v ++r+ Pd.00g733950.m01 54 SLGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--KVYIIRS 130 4789******644..678************666665....9********************9876666..9998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MLGQAGKSPA LSNTQYEFPV DGSPSRGQAK SSAVIQAQEV RSKLEPRFPS FVKSLGLPSL 60 FCKSHLPDKD ITMTLEDESG RQCQLKYIAY KTGLSAGWRQ FAASHNLIEG DVLVFQLVEP 120 TKFKVYIIRS NDLTEVDGGL GLLNLDSHTK RKDAGKFIDV SVYKDNAETG TEACNDATRK 180 RAHSPPSEAQ KKKKIGLQPV EQSEDDSDEV DSEVLEESKS PDTALQFEDI QSFENFSILV 240 NGLLVDSELP EDVRRKYYKL CCSQNAFLHE NVAEGMNHKL VVGAISETVN IADAIKACKL 300 TTTWDDFVSW DKYLKAFELL GMNVGFLRDR LCRLANLSND SGAAVEARMY KEAKIERSQA 360 GIGIRNIEVK LEELRDVCDE FGAAIESLRS KAEVYTLKFH EEVTAPW

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MLGQAGKSPA LSNTQYEFPV DGSPSRGQAK SSAVIQAQEV RSKLEPRFPS FVKSLGLPSL  60
FCKSHLPDKD ITMTLEDESG RQCQLKYIAY KTGLSAGWRQ FAASHNLIEG DVLVFQLVEP  120
TKFKVYIIRS NDLTEVDGGL GLLNLDSHTK RKDAGKFIDV SVYKDNAETG TEACNDATRK  180
RAHSPPSEAQ KKKKIGLQPV EQSEDDSDEV DSEVLEESKS PDTALQFEDI QSFENFSILV  240
NGLLVDSELP EDVRRKYYKL CCSQNAFLHE NVAEGMNHKL VVGAISETVN IADAIKACKL  300
TTTWDDFVSW DKYLKAFELL GMNVGFLRDR LCRLANLSND SGAAVEARMY KEAKIERSQA  360
GIGIRNIEVK LEELRDVCDE FGAAIESLRS KAEVYTLKFH EEVTAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	194	RKRAHSPPSEAQKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-28	B3 family protein