PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g734230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 242aa    MW: 27242.4 Da    PI: 10.6157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g734230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08154194954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Pd.00g734230.m01 154 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 194
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MMTMMMQMQM QKQQSLDHFC DSYHNSSNPT FPEIDFTWGS NSNITNNIET ISSLPIFHNP  60
NAVSSQHSQP TLINPALPSS VSFMGNQIQE PLTPRLIKTS PPPTSYEKRN SMAAMREMIF  120
RIAAMQPIQI DPESVKPPKR RNVKISKDPQ SVAARHRRER ISEKIRILQR LVPGGTKMDT  180
ASMLDEAIHY VKFLKKQVQT LERAGADRPI GVGFQGAGQL GNVNYSALLR PSHLVGSMQM  240
LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-48bHLH family protein