PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g736090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 195aa    MW: 22060.4 Da    PI: 4.8782
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g736090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.2e-16241546
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++
  Pd.00g736090.m01  2 TPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRT 41
                      9*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MTPQEERLVL ELHSKWGNRW SRIARKLPGR TDNEIKNYWR TRMRKKAQEK KRAASPSSSS  60
SNCSSSSNIT STEGGASFYD TGGLEIKASS GAKKTGGDHQ EQEDDKKRDQ KEYSLDDIWK  120
DINLPEVNSI EPVYNGYSEE ACNIISCPLM ASPAPWEYCS DSLWEMDEEE SKMFLPTTSD  180
QFLSCFEYGK ASLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.21e-53MYB_related family protein