PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g737090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 705aa    MW: 79636 Da    PI: 5.0555
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g737090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.13.2e-1103417033374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL++cA+av+s d + a++ L ++++++sp+gd +qRla+y++++L+ rla         l+p    e++ ++ l a++++  ++P+ k+s+
  Pd.00g737090.m01 341 TLLTQCAQAVASYDIRTANEQLRQIRQHSSPYGDGTQRLAHYLANGLELRLAA-----GVPLNP----EMSAADLLRAYQTYITACPFQKMSN 424
                       69**************************************************9.....222333....34579******************** PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                       + aN++I + +e+++r+HiiDf++ +G QWp+L+q L++R +gpp+lRiTgv+ p++g   +e++e+tg+rLa+++e+++vpfe+nv +ak++
  Pd.00g737090.m01 425 FYANRTIAKLAEKATRLHIIDFGVLYGYQWPCLIQCLSNRHGGPPTLRITGVEFPQPGfrPSERVEATGRRLANYCERFKVPFEYNV-IAKNW 516
                       *********************************************************9****************************9.7**** PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       e++++e+++++++E ++Vn+ ++l++l+de+v+ +  rd+vLkl+++++P+++++   + ++n++ F +rf eal ++s+lfd++e++lpre+
  Pd.00g737090.m01 517 ETIQYEDIKIDRDELIVVNCLYRLKNLPDETVTDSP-RDTVLKLIRRINPDIFIHGVVNGSYNAPFFDTRFREALFHFSSLFDMFEETLPRED 608
                       ****************************99888777.******************************************************** PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
                       ++r   E+e+ gr++ nv+aceg++r+er et+++W+ r ++aGF+++pl++++ k++++++   + + + v+e+  ++++gWk+r + ++S 
  Pd.00g737090.m01 609 QQRLLFEKEVYGRDVINVIACEGSRRFERPETYKQWQFRNKRAGFRQLPLDQEILKKVRSMVTSEYHKDFVVDEDGMWVLQGWKGRIIHAISY 701
                       **************************************************************9999888************************ PP

              GRAS 373 Wr 374
                       W+
  Pd.00g737090.m01 702 WK 703
                       *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    
MKAKVKGGGD NDHKIQAIEV DLALSWLTYE ADSSSVPAYS NQNIGTEFEA DHDFTDPSFF  60
LVNPDPSSDF SSLSGFSSEV DSPDSQSSNA ILKYISEMLM EEELENKPCM LQDCLALQAA  120
EKSLHDVLVQ DYPSSANSLL TSVYQNVENP DEGSNHSSNG SVAASNWVGS DWDCVQDVFQ  180
SSHIQISATE SPAYTLSVPN PLLSNGQGEI IAVESSSSFP IEPRELAKDV SFNSVQDGSS  240
SPRGSRSKKN RQREDGDDLD EGRSNKQSAV YADESELPEL FDKVLLCQGE KQESQSCSPQ  300
ESEQKEGSGK LQLNRKSRGS KGKKTRKKKP DDNTGGVDLW TLLTQCAQAV ASYDIRTANE  360
QLRQIRQHSS PYGDGTQRLA HYLANGLELR LAAGVPLNPE MSAADLLRAY QTYITACPFQ  420
KMSNFYANRT IAKLAEKATR LHIIDFGVLY GYQWPCLIQC LSNRHGGPPT LRITGVEFPQ  480
PGFRPSERVE ATGRRLANYC ERFKVPFEYN VIAKNWETIQ YEDIKIDRDE LIVVNCLYRL  540
KNLPDETVTD SPRDTVLKLI RRINPDIFIH GVVNGSYNAP FFDTRFREAL FHFSSLFDMF  600
EETLPREDQQ RLLFEKEVYG RDVINVIACE GSRRFERPET YKQWQFRNKR AGFRQLPLDQ  660
EILKKVRSMV TSEYHKDFVV DEDGMWVLQG WKGRIIHAIS YWKPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1315330RKSRGSKGKKTRKKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-176GRAS family protein