PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g738060.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 230aa MW: 25103 Da PI: 8.2273

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g738060.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00041	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H +H Pd.00g738060.m02 61 FECTTCNKVFRSYQALGGHRASH 83 89**********99999998887 PP
2	zf-C2H2	12.3	0.00051	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp+C k+F++ L H r+H Pd.00g738060.m02 140 HACPICLKVFPSGQALGGHKRSH 162 67******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MELAQPQLGS NNKCNSSKRK FQESYDFESR SEQSLKTLST TRGDVLDSEA VCKSSQKRSK 60 FECTTCNKVF RSYQALGGHR ASHKKIKGCF ASKVQSSENT IETDLSPEPT SDSKLSKSCN 120 NENPIEHDVK AEISTENKGH ACPICLKVFP SGQALGGHKR SHLIGGSAEN KNSQTIVIQK 180 PAAPEARDFL DLNLPAPVEE ESSSSHAAAF KPWWVGSSHK HEALVGLISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-28	C2H2 family protein