PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g738840.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 363aa MW: 40485.9 Da PI: 7.1856

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g738840.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl Pd.00g738840.m01 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.2	2.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Pd.00g738840.m01 67 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKLQ 120 TGLDGHDHRN SQDGFSGNSN DQPISKGQWE RRLQTDIHMA KQALCEALSL DKPPTHDLHL 180 QDSKPSINLG YNNNGQPNTN TCSRPHQAST YASNTENIAK LLESWMKNSP KGPSSAQNHN 240 QTNSETNLHQ ISSFKNKKNT AAGCSVSTSS EGAQSATTTP EQAFDSLFSF NSSTSDVSQS 300 MSVDENNANF TAETSCLFQD ESKPNLEGQV PLTLLEKWLL DDAAPHAHED LINMSLENTS 360 VLF

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKLQ  120
TGLDGHDHRN SQDGFSGNSN DQPISKGQWE RRLQTDIHMA KQALCEALSL DKPPTHDLHL  180
QDSKPSINLG YNNNGQPNTN TCSRPHQAST YASNTENIAK LLESWMKNSP KGPSSAQNHN  240
QTNSETNLHQ ISSFKNKKNT AAGCSVSTSS EGAQSATTTP EQAFDSLFSF NSSTSDVSQS  300
MSVDENNANF TAETSCLFQD ESKPNLEGQV PLTLLEKWLL DDAAPHAHED LINMSLENTS  360
VLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-116	MYB family protein