PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g742620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 379aa MW: 42612.7 Da PI: 9.3611

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g742620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	28.7	2.8e-09	206	242	1	38
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 kp+l+Wt+eLH+rF+ av+ L G + P i +m+ Pd.00g742620.m01 206 KPKLVWTNELHKRFLLAVRLL-GVDSKSPLDIGSVMNF 242 79*****************.99999******996 PP
2	Myb_DNA-binding	33.2	1.2e-10	208	289	1	48
TSSS-HHHHHHHHHHHHHTTTT.................................-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.................................tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT e++++++ av++lG + ++k+I ++m+ g+ +++ s++qky+ Pd.00g742620.m01 208 KLVWTNELHKRFLLAVRLLGVDskspldigsvmnfftllgaietkianlfldlgaHPKKILQHMNvPGLRKENVSSHLQKYR 289 679******************************************************************************7 PP
3	G2-like	37.8	4.2e-12	262	290	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 A Pk+il++m+v+gL e+v SHLQkYRl Pd.00g742620.m01 262 AHPKKILQHMNVPGLRKENVSSHLQKYRL 290 78**************************8 PP
4	Response_reg	54	9.3e-19	24	132	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vd + + + +l ++l + gy +v +a + +al ++++k+ +l+l+ +p+md +ellk++++ + k+p++++++ ++e+ +l l Pd.00g742620.m01 24 VLVVDGDSACLAILSRMLCNLGY-KVMTANRAYDALSIAQKKEdeLHLVLTEAHLPDMDKYELLKKMKAVS-KVPVVIMSDDDDESAMLGGLF 114 89*******************.***********888889*******************999.***************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga +++Kp ++ l + Pd.00g742620.m01 115 KGAVFYFVKPLTINSLKN 132 *********9998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MSDEKAISVE SVNSSSPRLE SVSVLVVDGD SACLAILSRM LCNLGYKVMT ANRAYDALSI 60 AQKKEDELHL VLTEAHLPDM DKYELLKKMK AVSKVPVVIM SDDDDESAML GGLFKGAVFY 120 FVKPLTINSL KNLWQFAFTK NINHVVIDLT EEETSVYAES QKENTSNEGL ESESLMTRDR 180 WLKRKNPEGT YKDEETENSD STSQKKPKLV WTNELHKRFL LAVRLLGVDS KSPLDIGSVM 240 NFFTLLGAIE TKIANLFLDL GAHPKKILQH MNVPGLRKEN VSSHLQKYRL SLKREQEAIM 300 KARARGPKKS NFPSHQSLST LNFRGGCSHT PNWYSTSTAY QPKRRSHVQD LSSHMSRPSP 360 TGSPPATRNW LALDRWGAL

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MSDEKAISVE SVNSSSPRLE SVSVLVVDGD SACLAILSRM LCNLGYKVMT ANRAYDALSI  60
AQKKEDELHL VLTEAHLPDM DKYELLKKMK AVSKVPVVIM SDDDDESAML GGLFKGAVFY  120
FVKPLTINSL KNLWQFAFTK NINHVVIDLT EEETSVYAES QKENTSNEGL ESESLMTRDR  180
WLKRKNPEGT YKDEETENSD STSQKKPKLV WTNELHKRFL LAVRLLGVDS KSPLDIGSVM  240
NFFTLLGAIE TKIANLFLDL GAHPKKILQH MNVPGLRKEN VSSHLQKYRL SLKREQEAIM  300
KARARGPKKS NFPSHQSLST LNFRGGCSHT PNWYSTSTAY QPKRRSHVQD LSSHMSRPSP  360
TGSPPATRNW LALDRWGAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	343	347	KRRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-52	ARR-B family protein