PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g746000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 310aa MW: 34328.4 Da PI: 8.2676

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g746000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	7.8e-06	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Pd.00g746000.m01 70 FVCEICNKGFQRDQNLQLHRRGH 92 89*******************88 PP
2	zf-C2H2	16.4	2.5e-05	146	168	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ Pd.00g746000.m01 146 WKCDKCSKKYAVQSDWKAHQKTC 168 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MSNITGDVEE GSFSSGNNTG ELEVHQENQQ QNHLQGSGSG GASGAQSNSN DPSAEVIALS 60 PTTLMATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTTTEIRKRV YICPEPTCVH 120 HNPARALGDL TGIKKHFSRK HGEKKWKCDK CSKKYAVQSD WKAHQKTCGT REYKCDCGTI 180 FSRRDSFITH RAFCDALAEE NNKVNHGLMS SQTQMPLPHD QLISSMAMNT NSSMGGGSDV 240 LNYDISNKNS LNKSFPDDLV PMQFKSMNMN IMAGGVGGPG MFSSTSESSS NGCHCKQLYH 300 QLPHDAEKLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	5e-93	C2H2 family protein