PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g746560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 219aa    MW: 24974.5 Da    PI: 9.5528
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g746560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.45.1e-30959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien   rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss
  Pd.00g746560.m01  9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFSS 59
                      79***********************************************96 PP
2K-box72.21.6e-24841711198
             K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       + ++e+ + + + + ++i+ ++ ++ +llG++Les+s++eLqq e+qLe+sl+kiR++K++ll+eqie+l++ ek+l e+n +Lr+k 
  Pd.00g746560.m01  84 QVDMEHGKDDTSSMARKIDFIEASKQKLLGNCLESCSIEELQQTENQLERSLSKIRARKTQLLREQIEKLKEEEKNLFEQNAKLREKC 171
                       556788899999*************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFSSS  60
SISNTLDRYQ KRVKDQGLGS KAVQVDMEHG KDDTSSMARK IDFIEASKQK LLGNCLESCS  120
IEELQQTENQ LERSLSKIRA RKTQLLREQI EKLKEEEKNL FEQNAKLREK CGMQPLCPPS  180
TRKDGENCAV RQPRTPDLED VETDLVIGPP ERRRSGQNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.14e-68MIKC_MADS family protein