PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g747610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 235aa    MW: 25516.4 Da    PI: 9.176
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g747610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18104154155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++++g
  Pd.00g747610.m01 104 CNYRGVRQRT-WGKWVAEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 154
                       56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MKKLKKIKIT IHLGENWGGG PGANEGGSLY FLFSTKVNCM TKLVKTDPRQ DGSNPVAETL  60
AKWKAYNDHL DSCNDESKPI RRVPAKGSKK GCMKGKGGPE NSRCNYRGVR QRTWGKWVAE  120
IRAPNRGSRL WLGTFPTAIE AALAYDEAAR AMYGSAARLN FPNISISSLS KDPSSRATLS  180
APSLLATSAG SESSGRSDHS EDCAAQGKVN YLSPNVENED TTTNRDQTNE DGEDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.21e-33ERF family protein