PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g750520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 260aa    MW: 29331.5 Da    PI: 8.0371
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g750520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72e-08107150755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + ErrRR r+++++   r l+P+      +K++Ka+i+  A +Y+++Lq
  Pd.00g750520.m01 107 ISERRRRGRMKEKLYAWRALVPNI-----TKMDKASIVGDALQYMQELQ 150
                       57*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDGANFDQFF NLIRENDQNP VVDRFDCDHD NNHFITNGCL IDNQFGPTTP GDMFGFNINS  60
LLPSFEGEKK EVPEEDINGR DDSSGTSMTT TTTTKRVKNI DKSRTLISER RRRGRMKEKL  120
YAWRALVPNI TKMDKASIVG DALQYMQELQ MQAKKLKSEI AGLEASLVGP PQRYQGYNNI  180
GNTGRIRMAN TSLLVSKKII QNSNLTAASE SLVLTVTLKL KISGLYVKLN QVKECEQEIN  240
LPNLKLWVIW ALLSEGLELI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-52bHLH family protein