PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g755210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 615aa    MW: 68875.1 Da    PI: 5.8081
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g755210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like764.9e-24199252155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Pd.00g755210.m01 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252
                       68*******************.9*******************************8 PP
2Myb_DNA-binding39.41.4e-12201251148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ ++++++v+av+q G +   +k+I   m+   +t++++ s++qky+
  Pd.00g755210.m01 201 RVVWSVDLHQKFVKAVHQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251
                       678***********************************************7 PP
3Response_reg81.42.9e-27191271109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+p+ +++l+++l+k  y ev+++  +++al+ll+ek+  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + + ++
  Pd.00g755210.m01  19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLARDALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQ 109
                       89*********************.***************999999**********************6644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ ++el++
  Pd.00g755210.m01 110 HGACDYLLKPIRMKELRN 127
                       ***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    
MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK  60
DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRTGSD QYDEGYFFSA EDLTSSRKRK  180
DVDNKYDDKD FSDCSSTKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLSRLQKD DIKSSFGGTK HSDYSSKDLQ GILSVQNSIN IQQNDVAHGS  300
YRFSGNNLVA QNADPKSNEG DIKGIVSEPV AEPKKGTTGN IPDSQNTRSS QMDFNSSYAE  360
TKKGLVGNVP DSQKIRSSQM CVNHSFASVE SEVNLMAFDS TIPTTYSWNQ IQLEKEHKPL  420
IQLNNGFSKP PLPGPQHHFQ ADQLQSIPSI SSRPSIPGGD VTGSSKSKPS YSEYTNHHGS  480
RVSPTISPTI SATDSFPGQT KSCVVDHQVS ETISTSTSNI KNQGINLSTD LESAQRNLIL  540
GSTSPFASLD DEFQFCWYQG DCYGMNLELQ NVEFSEYTDP THVTEVPAHL YDALRFEYPC  600
DPSEYSVLDQ GLFIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-135ARR-B family protein