PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g759240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 490aa    MW: 55044.3 Da    PI: 6.7419
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g759240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS317.72.5e-971384841374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                       l++lL+ecA a+s ++l +a+++L +ls++asp+g +  +R++ayf++A+ +r+ +s+ ++++ l   ++         +a+++f+ +sP++k
  Pd.00g759240.m01 138 LITLLFECAVAISVDNLPEAHRMLLELSQMASPYGpSCAERVVAYFAKAMTSRVINSWLGICSPLVNYKS-------IHSAFQVFNTISPFIK 223
                       5789*******************************9999***********************87765554.......46899*********** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       f+h+t NqaIlea+++ +r          GlQWpaL++ La+R egpp++R+Tgvg     s+e+l etg++L++fA++lg++fef++ ++++
  Pd.00g759240.m01 224 FAHFTSNQAILEAFHRRDR----------GLQWPALFHILATRMEGPPQVRMTGVGT----SSENLMETGKQLSNFAKRLGLSFEFHP-IVRK 301
                       ****************986..........****************************....9**************************.799* PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       + d++ ++ +v++gE+laV++    h+l+d +++  +    +++l+ +l P++v++veq+++h s+sFl+rf+ +l+yys++fdsle+ l+++
  Pd.00g759240.m01 302 IGDIDASMVQVRRGETLAVHWLQ--HSLYDATGPDWK----TMRLIEELAPRIVTLVEQDMSH-SGSFLDRFVGSLHYYSTMFDSLESYLSSD 387
                       **********************9..999999999888....**********************.899************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerle.eaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvs 369
                       +  r++vE+ l+ rei n++a  g +r  +  ++++Wr+ l+ + GF +v +s + ++qa+l+l++++  +gy++ + +g++ lgWkd +L++
  Pd.00g759240.m01 388 NPSRHNVEHCLFYREINNILAIGGPARSGED-KFRQWRSELGgRNGFMQVGMSANSMAQAQLILNMFPpTHGYSLVQGDGTIRLGWKDTSLYV 479
                       **************************77665.5*******9637************************************************* PP

              GRAS 370 vSaWr 374
                       +SaW+
  Pd.00g759240.m01 480 ASAWT 484
                       ****6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MAHGTMNMIQ SHEPWTNYPS PVVGFQNNPT SNPFPNPKPI ENRFVTLERS ELSQWVEHIT  60
KQLIDDLPEP AAATTTTDTL QASDDYFVPS SLSTDLISPS KISQRSYGDH HDHELQLHAD  120
NNIRARGMSK LDEHGLSLIT LLFECAVAIS VDNLPEAHRM LLELSQMASP YGPSCAERVV  180
AYFAKAMTSR VINSWLGICS PLVNYKSIHS AFQVFNTISP FIKFAHFTSN QAILEAFHRR  240
DRGLQWPALF HILATRMEGP PQVRMTGVGT SSENLMETGK QLSNFAKRLG LSFEFHPIVR  300
KIGDIDASMV QVRRGETLAV HWLQHSLYDA TGPDWKTMRL IEELAPRIVT LVEQDMSHSG  360
SFLDRFVGSL HYYSTMFDSL ESYLSSDNPS RHNVEHCLFY REINNILAIG GPARSGEDKF  420
RQWRSELGGR NGFMQVGMSA NSMAQAQLIL NMFPPTHGYS LVQGDGTIRL GWKDTSLYVA  480
SAWTCSHASR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-133GRAS family protein