PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g761330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 248aa    MW: 28384.6 Da    PI: 10.096
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g761330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.6e-1555102355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++h ++ErrRR+++N++f  Lr+l+P       +K++Ka+iL  ++eY+k+L+
  Pd.00g761330.m01  55 ANHVMAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 102
                       5899***********************8.....8*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MLVPIEGTSQ WLLKYILFSV PFLHTKYRDE NSPKSHEGDA STRLRKGTPQ DELSANHVMA  60
ERRRREKLNE RFIILRSLVP FVTKMDKASI LGDTIEYVKQ LRKKIQDLEA RNVQMEDDQR  120
SRSSGEIHRS NSMKELRSGL TVVERTRVGP PGSDKRKLRI VEGSGEVSII ESDGLLELQC  180
PYREGLLLDI MQTLRELRIE TTVVQSSLNN GFFVAELRAK VKENVNGKKI SITEVKRVIN  240
QIIPQSDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16166ERRRRE
26267RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.19e-57bHLH family protein