PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g763330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 161aa    MW: 17828.3 Da    PI: 6.0819
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g763330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.21.4e-382957100
            DUF260   7 vlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                       +lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la++++
  Pd.00g763330.m01   2 ILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQDLPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLAKAQA 94 
                       68****************************************************************************************998 PP

            DUF260 100 e 100
                       e
  Pd.00g763330.m01  95 E 95 
                       7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MILRRRCADK CVLAPYFPPT EPAKFTIAHR VFGASNIIKF LQDLPESQRA DAVSSMVYEA  60
SARIRDPVYG CAGAICHLQK QVNELQAQLA KAQAELVNMQ CQQANLVALI CMEMTQSNEQ  120
GSPQQSLDHN FIASSHGSNQ SNLSFLDDTT TLGSLWEPLW T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.12e-63LBD family protein