PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g766000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 253aa    MW: 28568.6 Da    PI: 6.5311
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g766000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.32.5e-0889165276
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr...traetrtgCkaklkvkkekdgkw 76 
                       +Y++Y+++ GF v k++s++  ++g+ +  t  C +egk++++++++ +++    ++  +  + k++++++ +++ k 
  Pd.00g766000.m01  89 YYKQYGRQSGFPVIKRSSTNG-DDGNLKYVTISCAREGKSKTQRSAKMQKNFddiKELANDSDDKCMVVMNWMHNLKE 165
                       8************99987776.9999***************9998844443333344445555566666666655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGTRVSASES EDTGHINNNS PIDQGMEESS ARLENNQHDD AVEMNFNGIE KENNGDETEN  60
NDTVMSVEEK VQDPQVGMIF DSIDEVITYY KQYGRQSGFP VIKRSSTNGD DGNLKYVTIS  120
CAREGKSKTQ RSAKMQKNFD DIKELANDSD DKCMVVMNWM HNLKEEICKH DGTCKRTEPT  180
PQSPIGKSFE PDVNGLPNAS QRILTPLPVR SKGRPPFKRR QSKTEQVIKK RQRTGRKTKY  240
RQDNTDGGTE VSK