PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g767780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 241aa MW: 27502.3 Da PI: 9.5376

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g767780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	91	145	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F ++++++ ++++ LA++l+L++rqV vWFqNrRa+ k Pd.00g767780.m01 91 RKKLRLTKEQSTLLEESFSRHSTLNPARKQSLAEQLNLKQRQVEVWFQNRRARTK 145 678899***********************************************98 PP
2	HD-ZIP_I/II	112	4e-36	91	179	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq++lLEesF+++++L+p rK++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+ k+++++l +en+rL+ke +eL+ + Pd.00g767780.m01 91 RKKLRLTKEQSTLLEESFSRHSTLNPARKQSLAEQLNLKQRQVEVWFQNRRARTKLKQTEVDCEFWKKRCESLGNENRRLKKELQELK-S 179 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MGGDEEACNT KLALGLGVGE YASRQEMRKK ENPLVCLDLS FALCPKQEVA SLGDRMENRS 60 SLRAMDEDEE SERSIDTNNK SIIMNNKNGV RKKLRLTKEQ STLLEESFSR HSTLNPARKQ 120 SLAEQLNLKQ RQVEVWFQNR RARTKLKQTE VDCEFWKKRC ESLGNENRRL KKELQELKSL 180 NKNGASPLYI QIPKATMLSM CPSCERMVKA HHQDQAAAKN TEDLNVVRKS NKLQGGFDGT 240 N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	148	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22800.1	1e-53	HD-ZIP family protein