PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g768400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 242aa    MW: 27501.3 Da    PI: 5.2915
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g768400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.9e-135496754
                      HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                        Er+RR+++N++++ Lr ++Pk +      K++Ka+i + A++YI++L
  Pd.00g768400.m01 54 VSERNRRKKLNERLFALRAVVPKiS------KMDKASIIKDAIDYIQEL 96
                      57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDNIGDEYKH YWETNMFLQN EELDSWGLDE AFSGYYDSSS PDGGASSMAS KNIVSERNRR  60
KKLNERLFAL RAVVPKISKM DKASIIKDAI DYIQELHEQE RRIQTEIGEL ESGRSKKNMG  120
SEFDQELPVL LRSKKKKIEQ LYDSGGSRTS TIEVLELRVT YMGEKTVVAS LTCSKRTDTM  180
VKLCEVFESL KLKIITANIT AFSGRVLKTV FIEADEEEKD HLKIKIETAI AALNDPQSPM  240
SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-89bHLH family protein