PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g774710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 300aa    MW: 34039.9 Da    PI: 6.6944
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g774710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.36e-09234281653
                       S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
          Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                       +++k  +e+Le++++k++ p+ +++  + + ++L+ ++V  WF  +R 
  Pd.00g774710.m01 234 RLKKAHVETLESVYRKTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRS 281
                       5778899*************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MAFASALNTP KGLHCLTLQS SRNERPPTNL ILPRQFPARF SSTLVLARRR NQRTEVASSK  60
PKINKKSLAK KEVKDEEEEE EEDVDEDAID ALFRLLEEDL KNDDASLDDE DLTEEELAKL  120
EQELKTWQLR RLAAALKVGR RKTSIKILAA ELCLDRPVVL ELLRNPPPSL LMMCAALPDE  180
PAPTISVSQT MPIETDVETT VETVVETTTE SSEVETTVNK PIHVMQHKFS AQKRLKKAHV  240
ETLESVYRKT KRPTNAMISS IVHVTNLPRK RVVKWFEDKR SEDGVTDSRL PYRRPAPNTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.13e-62HB-other family protein