PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g777230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 425aa    MW: 46177.8 Da    PI: 7.9859
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g777230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR46.19.9e-15137175241
               TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                       ++k+CnCk+s+Clk+YCeCfaag +C+  C+C++C+N+ +
  Pd.00g777230.m01 137 KQKQCNCKNSRCLKLYCECFAAGIYCEG-CNCSNCHNNVD 175
                       89*************************9.********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MEQSETVSQI APKKLARQLD FTTVFRASAN AALPEVQLQL QLQAPSQAQL SQNSPATSHV  60
HLQLQSPPPP PVAQSPKQLT PPPAIPQFLA RPSPAPAANS RIQHPVHKLS ISTSQASKQE  120
SPISRQRGDG KDGTPKKQKQ CNCKNSRCLK LYCECFAAGI YCEGCNCSNC HNNVDNEAAR  180
QEAVGLILER NPNAFRPKIA SSPQESRDGN RRRETIDESS TNLSTQEGKE CKKEHDIQNS  240
LHDDHLGVNE ADRDESSYSG LNGGDVQNSR PMSPGTLALM CDEQDKMFMA AGLPNGVGSS  300
SPSMTQKSTQ EIGCTEVYAE QERLVLTGFR DFLNHLITRG SIKETMCSPQ AKRERVSQKE  360
PVQGGTAKPS PEPRWQKEAY SNGVAKSPVS ANGKMLQPVT TLHPVATVTS GDNDLSLKVG  420
LPIEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.12e-39CPP family protein