PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g783150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 494aa MW: 55012.5 Da PI: 7.8193

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g783150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.2e-17	147	196	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g783150.m01 147 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 196 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MWDLNDSPDQ RPRGDESEGC SSQKTSADGD EEKGKRLAKT RGGGGGKIFG FSMTHEESMD 60 SDPPVTVTRQ FFPVELDSTS EIMGPTRGSV PPPAPPSSSL SSFPRAHWVG VNFGQSDSGS 120 PGKPPAAVEA AHQPMKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA 180 HAAARAYDRA AIKFRGVEAD INFSIEDYEE DLKQMTNLTK EEFVHVLRRQ STGFPRGSSK 240 YRGVTLHKYV YLGLFDTEID AARAYDKAAI KCNGKEAVTN FDPSIYENEL NPSSEHNLDL 300 SLGNSNSKKN NQAFGSSDHG QNAAVEVQHS ASMQLEADWR NQGFQQKLNL QRDRSREESD 360 AHRRDGYLET EAMQLLLRTN LHSPAPTEMH KYGQFSRRPN VGDTQMPHTF PPHFNSPNNY 420 HHVQFPSSSE GGRIGSDLSL SMSDHPHQQQ WQSGMPTSNI FATAAASSGF PPQIRPSAQN 480 CWLQKSGFHS LTRR

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MWDLNDSPDQ RPRGDESEGC SSQKTSADGD EEKGKRLAKT RGGGGGKIFG FSMTHEESMD  60
SDPPVTVTRQ FFPVELDSTS EIMGPTRGSV PPPAPPSSSL SSFPRAHWVG VNFGQSDSGS  120
PGKPPAAVEA AHQPMKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA  180
HAAARAYDRA AIKFRGVEAD INFSIEDYEE DLKQMTNLTK EEFVHVLRRQ STGFPRGSSK  240
YRGVTLHKYV YLGLFDTEID AARAYDKAAI KCNGKEAVTN FDPSIYENEL NPSSEHNLDL  300
SLGNSNSKKN NQAFGSSDHG QNAAVEVQHS ASMQLEADWR NQGFQQKLNL QRDRSREESD  360
AHRRDGYLET EAMQLLLRTN LHSPAPTEMH KYGQFSRRPN VGDTQMPHTF PPHFNSPNNY  420
HHVQFPSSSE GGRIGSDLSL SMSDHPHQQQ WQSGMPTSNI FATAAASSGF PPQIRPSAQN  480
CWLQKSGFHS LTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	5e-95	AP2 family protein