PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g785010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 210aa    MW: 23943.7 Da    PI: 4.3534
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g785010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.67.6e-2114111195
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr. 87 
                       f+k+l++sdv++++r++lpkk ae+h   ++++e++ +++ d +g  +W++k+++  +++s++yvl+ ++ eFv+a+gL+ gDf++ +   + 
  Pd.00g785010.m01  14 FQKELKNSDVSSLRRMILPKKAAEAHlpALESKEGIPISMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGEFVNAHGLQLGDFIMVYQ--Dn 103
                       99**************************666668889********9*******9989999999***9.******************993..33 PP

                       SEE..EEE CS
                B3  88 sefelvvk 95 
                       +++++v++
  Pd.00g785010.m01 104 QNQNYVIQ 111
                       66666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MLQVIDPTRL RFLFQKELKN SDVSSLRRMI LPKKAAEAHL PALESKEGIP ISMDDIDGLH  60
VWSFKYRFWP NNNSRMYVLE NTGEFVNAHG LQLGDFIMVY QDNQNQNYVI QAKKASDQDH  120
VYGDISTMNN GVNDLFLDES EANKSSSFYM PTMAMDEDTT AGMSFVYDTT TFSNDSLLDF  180
FGGSMTNYSR NGPLHESFGS VENLSLDDYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.17e-88B3 family protein