PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g785260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 602aa    MW: 66987.9 Da    PI: 5.6915
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g785260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.94.5e-1112525591317
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lLl+cAeav+++d+ la+++L +l+  ++p gd+mqR+a++fteAL+arl+   +++  ++a +p +  + ns e l+++++ ++++P++
  Pd.00g785260.m01 252 LVHLLLACAEAVAKEDFMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLTAtlTTNPAASAPKPFSPFPPNSLEILKIYQIVYQACPYI 344
                       68****************************************************943333444444444444567****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      e+++etg+ L+++A +l+vpfef++ v +
  Pd.00g785260.m01 345 KFAHFTANQAIFEAFESEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----CIEAVKETGRCLTELALSLHVPFEFHA-VGE 432
                       **********************************************************....***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +ledl++++++ + gEalaVn v +lhr++       ++  +vL ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+
  Pd.00g785260.m01 433 QLEDLKPHMFNRRIGEALAVNTVNRLHRVP------GNYLGNVLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPP 519
                       *****************************9......444557*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWre 317
                       +s +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+
  Pd.00g785260.m01 520 DSAQRAKVEQYIFAPEIRNIVACEGAERTERHERLEKWRK 559
                       **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MSISMSESKK TTTPPSSEME QSSLTPPSLN FPTLKFELDG DVEVQSPDHS IWESLFSEQF  60
DTDFMVLSPV PNNMLDSPQP GASLSAAHNN YNYYNYAQSM QGQSLSGCSP PRFSPHLGAF  120
SSTHNPKGKG LSPLRRVFNS PVNQYMQPAD QNMQSMPPAS IEDFLDDYQR DSFIAAYQNP  180
TTTTTTSSSK MSGTSSQSYN PHDMPTSSTV PAAPLDCLPM QNSSRFSRSN LNYMAPNLPM  240
APEQEQDSGL QLVHLLLACA EAVAKEDFML ARRYLHHLNR VVTPLGDSMQ RVASCFTEAL  300
SARLTATLTT NPAASAPKPF SPFPPNSLEI LKIYQIVYQA CPYIKFAHFT ANQAIFEAFE  360
SEERVHVIDL DILQGYQWPA FMQALAARPG GAPFLRITGV GPCIEAVKET GRCLTELALS  420
LHVPFEFHAV GEQLEDLKPH MFNRRIGEAL AVNTVNRLHR VPGNYLGNVL AMIRDQAPNI  480
VTLVEQEASH NGPYFLGRFL EALHYYSAIF DSLDATFPPD SAQRAKVEQY IFAPEIRNIV  540
ACEGAERTER HERLEKWRKD DGGQRLLALG VAGQVYNGCF CMEMLNLLMI SFNLFLLLRT  600
RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-74GRAS family protein