PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g785810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 243aa    MW: 27002.3 Da    PI: 6.8383
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g785810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.8e-085262446
                      HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                      W++Ia++++ +Rt++++k++w++
  Pd.00g785810.m01  5 WSAIAAHLP-KRTDNEVKNYWHS 26
                      *********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MFGMWSAIAA HLPKRTDNEV KNYWHSRLKK LLALKGYDPV THKPKTTIFG FANGSTDDPK  60
TGSNLNHIAQ WESARLQAEA RFVRDLELHK QAHHPYNNND ICAASTILLG HNKDFGPTDQ  120
LFGQNGPQCL DILRAWESIL MSNYSKAARG QDHVNSLGNG LAGEFEPSIV SAISSNGSSL  180
MDYFFHEPVG QCFDENHGTN ITEPFSAVHH NMGFKNGACL EDFGLWEIVM RGRKDCPVSG  240
ISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.14e-27MYB family protein