PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g786180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 257aa    MW: 28801.2 Da    PI: 6.5038
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g786180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.8e-0817412348
                      -HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      +W++I ++++ +Rt++++k++w+++l
  Pd.00g786180.m01 17 SWSAITAHLP-KRTDNEVKNYWHSHL 41
                      7*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MYRHEVEYGF LSLGLWSWSA ITAHLPKRTD NEVKNYWHSH LKKRLALKGY DPVTHKLKTT  60
IFGFANGSTD DPKTDANLNH IAQWESARLQ AEARFVKDSE LHKQAYHPYN NNDISAASSI  120
LLGHNKDFGP TDQLFGQNAP QRLDILRAWE SILMSNYSKA AGGQDHVNSF GNHLAGDFEP  180
PIISAISNNG SSLMDCFVHE PVGQCFDENY CSSITEPFAT VHHNMGFKNN GACLEDFGLW  240
EIIMQGKKDC PISGISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-29MYB family protein