PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g789610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 591aa MW: 67213.4 Da PI: 5.699

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g789610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100	2.5e-31	81	168	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r++tr+gCka+++vkk+++g+w v+kl++eHnHel+p Pd.00g789610.m01 81 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQVVCSREGFRRDGGEN--RSKRQRTVTRVGCKAQMTVKKQSSGRWAVSKLVKEHNHELVP 168 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MDFEPLNIEN EAVEFDMGGS GEDDATALDL EHPDDSYDIF DDDLVQSSNS TRSRDDLAGG 60 DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR 120 RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH 180 VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGGQ 240 FVFDYLKRMQ AEDPGFFFAV QDQDRIIRAA VRQVFPGTRH RFCKWNVLRE AQEKLSDIYH 300 SHPTFEAEFQ RCINMTETID EFESCWESLL QRYDIGDNEW LQSMYDARQQ WVPVFLRDTF 360 FGEMSVTQGS DNINSYFDGY INASTNIQVL IKQYEKAIAT RHEKEVKADY DTMNISPILR 420 TPSPMEKQAA KLYTRVVFMK FQEELVETLA YPATMVDDTG SETVYRVAKF GEDHKVYFVR 480 EAIKYVEEGA ESGRVYNVAM DALHEAASEV TAAKKHGLGV VQSTSINCSQ QLQSCTVDQD 540 KKIKELAAEL DIASQQCEAY RAKLLAILKD MEEQKLKISV NVRNVRLNLR S

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MDFEPLNIEN EAVEFDMGGS GEDDATALDL EHPDDSYDIF DDDLVQSSNS TRSRDDLAGG  60
DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR  120
RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH  180
VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGGQ  240
FVFDYLKRMQ AEDPGFFFAV QDQDRIIRAA VRQVFPGTRH RFCKWNVLRE AQEKLSDIYH  300
SHPTFEAEFQ RCINMTETID EFESCWESLL QRYDIGDNEW LQSMYDARQQ WVPVFLRDTF  360
FGEMSVTQGS DNINSYFDGY INASTNIQVL IKQYEKAIAT RHEKEVKADY DTMNISPILR  420
TPSPMEKQAA KLYTRVVFMK FQEELVETLA YPATMVDDTG SETVYRVAKF GEDHKVYFVR  480
EAIKYVEEGA ESGRVYNVAM DALHEAASEV TAAKKHGLGV VQSTSINCSQ QLQSCTVDQD  540
KKIKELAAEL DIASQQCEAY RAKLLAILKD MEEQKLKISV NVRNVRLNLR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-99	FAR1 family protein