PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g791960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 188aa MW: 21640.7 Da PI: 9.8314

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g791960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	38.4	2.1e-12	64	92	28	56
HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRakek 56 ++++ LA++l+L++rqV vWFqNrRa+ k Pd.00g791960.m01 64 ARKQSLAEQLNLKQRQVEVWFQNRRARTK 92 6899***********************98 PP
2	HD-ZIP_I/II	82	9.2e-27	62	126	25	90
HD-ZIP_I/II 25 eperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 + rK++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+ k+++++l +en+rL+ke +eL+ + Pd.00g791960.m01 62 NGARKQSLAEQLNLKQRQVEVWFQNRRARTKLKQTEVDCEFWKKRCESLGNENRRLKKELQELK-S 126 6789***********************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MRKKENPLVC LDLSFALCPK QEVASLGDRM ENRSSLRAMD EDEESERSID TNNKSIIMNN 60 KNGARKQSLA EQLNLKQRQV EVWFQNRRAR TKLKQTEVDC EFWKKRCESL GNENRRLKKE 120 LQELKSLNKN GASPLYIQIP KATMLSMCPS CERMVKAHHQ DQAAAKNTED LNVVRKSNKL 180 QGGFDGTN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	95	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	1e-38	HD-ZIP family protein