PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g793190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 237aa MW: 27422.8 Da PI: 9.0333

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g793190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.8e-19	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+++G g+W+++ar g++R +k+c++rw +yl Pd.00g793190.m01 24 KGPWTAEEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 71 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	77	121	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++v++++++G++ W+tIar ++ gRt++++k++w+++ Pd.00g793190.m01 77 RGQITPNEESIIVELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 121 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MTVDRWNKSH QMGWGIIEEE GWRKGPWTAE EDRLLIEYVR LHGEGRWNSV ARLAGLKRNG 60 KSCRLRWVNY LRPDLKRGQI TPNEESIIVE LHARWGNRWS TIARSLPGRT DNEIKNYWRT 120 HFKKKAKVPS DASEKAKTQV KRIMALLDEN ENNKISSWPQ VKQDMETSSA AYPHHTADHQ 180 EQGFFYSMLN GNVYVPEASS NEDSFLWDGL WNLDDVHGNF GTAAGKASFH NLVVPFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	7e-91	MYB family protein